For relatively shallow cracks and knots, black or brown CA works well. For larger cracks, a dyed or filled epoxy is the way to go. I use aluminum HVAC tape to seal the bottoms and edges because it seals, well, can be sort of shaped along edges if needed, won't release because of the heat and still comes off fairly easily when done. For the cracks on the end, I would consider butterflies to stabilize them.
I use Devcon 2-ton epoxy for fills like this because it has a 30 minute set time which gives it longer for bubbles to work out. Coffee makes an excellent fill material, BTW. One of my favorite fill materials is brass powder mixed with epoxy. I bought the brass powder on Amazon. You add enough powder so that the epoxy becomes like a putty and then simply press it into the cracks (wear gloves). When you sand it to a high polish (800+ grit), it looks like you poured metal into it.
Experiment with some scraps to figure out how much brass you need to add. If you do not add enough, it just looks sort of green and not like metal. A 30 minute epoxy is the minimum set up time need to give you enough time to mix and apply. Leave it a little proud of the surface and use a block plane to level it after is cured. I also like using a blue mica powder/dye. it gives you a turquoise look. Turquoise sand is another option, though for deep fills, I would fill to within about 1/4" of the surface with plain epoxy and then use the sand for just the top.